Proteomic characterization reveals that MMP-3 correlates with bronchiolitis obliterans syndrome following allogeneic hematopoietic cell and lung transplantation

dc.contributor.authorLiu, Xiaowen
dc.contributor.authorYue, Zongliang
dc.contributor.authorYu, Jeffrey
dc.contributor.authorDaguindau, Etienne
dc.contributor.authorKushekhar, Kushi
dc.contributor.authorZhang, Qing
dc.contributor.authorOgata, Yuko
dc.contributor.authorGafken, Philip R.
dc.contributor.authorInamoto, Yoshihiro
dc.contributor.authorGracon, Adam
dc.contributor.authorWilkes, David S.
dc.contributor.authorHansen, John A.
dc.contributor.authorLee, Stephanie J.
dc.contributor.authorChen, Jake Yue
dc.contributor.authorPaczesny, Sophie
dc.contributor.departmentBioHealth Informatics, School of Informatics and Computingen_US
dc.date.accessioned2018-02-26T16:44:25Z
dc.date.available2018-02-26T16:44:25Z
dc.date.issued2016-08
dc.description.abstractImproved diagnostic methods are needed for bronchiolitis obliterans syndrome (BOS), a serious complication after allogeneic hematopoietic cell transplantation (HCT) and lung transplantation. For proteins candidate discovery, we compared plasma pools from HCT transplantation recipients with: BOS at onset (n=12), pulmonary infection (n=16), chronic graft-versus-host disease without pulmonary involvement (n=15), and no chronic complications post-HCT (n=15). Pools were labeled with different tags [isobaric Tags for Relative and Absolute Quantification (iTRAQ)], and two software tools identified differentially expressed proteins (≥1.5-fold change). Candidate proteins were further selected using a six-step computational biology approach. The diagnostic value of the lead candidate, matrix metalloproteinase-3 (MMP-3), was evaluated by ELISA in plasma of a verification cohort (n=112) with and without BOS following HCT (n=76) or lung transplantation (n=36). MMP-3 plasma concentrations differed significantly between patients with and without BOS (AUC=0.77). Thus, MMP-3 represents a potential non-invasive blood test for diagnosis of BOS.en_US
dc.eprint.versionAuthor's manuscripten_US
dc.identifier.citationLiu, X., Yue, Z., Yu, J., Daguindau, E., Kushekhar, K., Zhang, Q., … Paczesny, S. (2016). Proteomic characterization reveals that MMP-3 correlates with bronchiolitis obliterans syndrome following allogeneic hematopoietic cell and lung transplantation. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 16(8), 2342–2351. https://doi.org/10.1111/ajt.13750en_US
dc.identifier.issn1600-6135en_US
dc.identifier.urihttps://hdl.handle.net/1805/15274
dc.language.isoen_USen_US
dc.publisherWileyen_US
dc.relation.isversionof10.1111/ajt.13750en_US
dc.relation.journalAmerican journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeonsen_US
dc.rightsPublisher Policyen_US
dc.sourcePMCen_US
dc.subjectbasic (laboratory) research/scienceen_US
dc.subjectbiomarkeren_US
dc.subjectbone marrow/hematopoietic stem cell transplantationen_US
dc.subjectbronchiolitis obliterans (BOS)en_US
dc.subjectlung transplantation/pulmonologyen_US
dc.subjecttranslational research/scienceen_US
dc.titleProteomic characterization reveals that MMP-3 correlates with bronchiolitis obliterans syndrome following allogeneic hematopoietic cell and lung transplantationen_US
dc.typeArticleen_US
Files
Original bundle
Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
7.pdf
Size:
956.57 KB
Format:
Adobe Portable Document Format
Description:
License bundle
Now showing 1 - 1 of 1
No Thumbnail Available
Name:
license.txt
Size:
1.99 KB
Format:
Item-specific license agreed upon to submission
Description: