Proteomic characterization reveals that MMP-3 correlates with bronchiolitis obliterans syndrome following allogeneic hematopoietic cell and lung transplantation
dc.contributor.author | Liu, Xiaowen | |
dc.contributor.author | Yue, Zongliang | |
dc.contributor.author | Yu, Jeffrey | |
dc.contributor.author | Daguindau, Etienne | |
dc.contributor.author | Kushekhar, Kushi | |
dc.contributor.author | Zhang, Qing | |
dc.contributor.author | Ogata, Yuko | |
dc.contributor.author | Gafken, Philip R. | |
dc.contributor.author | Inamoto, Yoshihiro | |
dc.contributor.author | Gracon, Adam | |
dc.contributor.author | Wilkes, David S. | |
dc.contributor.author | Hansen, John A. | |
dc.contributor.author | Lee, Stephanie J. | |
dc.contributor.author | Chen, Jake Yue | |
dc.contributor.author | Paczesny, Sophie | |
dc.contributor.department | BioHealth Informatics, School of Informatics and Computing | en_US |
dc.date.accessioned | 2018-02-26T16:44:25Z | |
dc.date.available | 2018-02-26T16:44:25Z | |
dc.date.issued | 2016-08 | |
dc.description.abstract | Improved diagnostic methods are needed for bronchiolitis obliterans syndrome (BOS), a serious complication after allogeneic hematopoietic cell transplantation (HCT) and lung transplantation. For proteins candidate discovery, we compared plasma pools from HCT transplantation recipients with: BOS at onset (n=12), pulmonary infection (n=16), chronic graft-versus-host disease without pulmonary involvement (n=15), and no chronic complications post-HCT (n=15). Pools were labeled with different tags [isobaric Tags for Relative and Absolute Quantification (iTRAQ)], and two software tools identified differentially expressed proteins (≥1.5-fold change). Candidate proteins were further selected using a six-step computational biology approach. The diagnostic value of the lead candidate, matrix metalloproteinase-3 (MMP-3), was evaluated by ELISA in plasma of a verification cohort (n=112) with and without BOS following HCT (n=76) or lung transplantation (n=36). MMP-3 plasma concentrations differed significantly between patients with and without BOS (AUC=0.77). Thus, MMP-3 represents a potential non-invasive blood test for diagnosis of BOS. | en_US |
dc.eprint.version | Author's manuscript | en_US |
dc.identifier.citation | Liu, X., Yue, Z., Yu, J., Daguindau, E., Kushekhar, K., Zhang, Q., … Paczesny, S. (2016). Proteomic characterization reveals that MMP-3 correlates with bronchiolitis obliterans syndrome following allogeneic hematopoietic cell and lung transplantation. American Journal of Transplantation : Official Journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 16(8), 2342–2351. https://doi.org/10.1111/ajt.13750 | en_US |
dc.identifier.issn | 1600-6135 | en_US |
dc.identifier.uri | https://hdl.handle.net/1805/15274 | |
dc.language.iso | en_US | en_US |
dc.publisher | Wiley | en_US |
dc.relation.isversionof | 10.1111/ajt.13750 | en_US |
dc.relation.journal | American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons | en_US |
dc.rights | Publisher Policy | en_US |
dc.source | PMC | en_US |
dc.subject | basic (laboratory) research/science | en_US |
dc.subject | biomarker | en_US |
dc.subject | bone marrow/hematopoietic stem cell transplantation | en_US |
dc.subject | bronchiolitis obliterans (BOS) | en_US |
dc.subject | lung transplantation/pulmonology | en_US |
dc.subject | translational research/science | en_US |
dc.title | Proteomic characterization reveals that MMP-3 correlates with bronchiolitis obliterans syndrome following allogeneic hematopoietic cell and lung transplantation | en_US |
dc.type | Article | en_US |