Gray level co-occurrence matrix and wavelet analyses reveal discrete changes in proximal tubule cell nuclei after mild acute kidney injur

dc.contributor.authorPantic, Igor
dc.contributor.authorCumic, Jelena
dc.contributor.authorDugalic, Stefan
dc.contributor.authorPetroianu, Georg A.
dc.contributor.authorCorridon, Peter R.
dc.contributor.departmentMedicine, School of Medicine
dc.date.accessioned2023-11-16T11:53:28Z
dc.date.available2023-11-16T11:53:28Z
dc.date.issued2023-03-10
dc.description.abstractAcute kidney injury (AKI) relates to an abrupt reduction in renal function resulting from numerous conditions. Morbidity, mortality, and treatment costs related to AKI are relatively high. This condition is strongly associated with damage to proximal tubule cells (PTCs), generating distinct patterns of transcriptional and epigenetic alterations that result in structural changes in the nuclei of this epithelium. To this date, AKI-related nuclear chromatin redistribution in PTCs is poorly understood, and it is unclear whether changes in PTC chromatin patterns can be detected using conventional microscopy during mild AKI, which can progress to more debilitating forms of injury. In recent years, gray level co-occurrence matrix (GLCM) analysis and discrete wavelet transform (DWT) have emerged as potentially valuable methods for identifying discrete structural changes in nuclear chromatin architecture that are not visible during the conventional histopathological exam. Here we present findings indicating that GLCM and DWT methods can be successfully used in nephrology to detect subtle nuclear morphological alterations associated with mild tissue injury demonstrated in rodents by inducing a mild form of AKI through ischemia–reperfusion injury. Our results show that mild ischemic AKI is associated with the reduction of local textural homogeneity of PTC nuclei quantified by GLCM and the increase of nuclear structural heterogeneity indirectly assessed with DWT energy coefficients. This rodent model allowed us to show that mild ischemic AKI is associated with the significant reduction of textural homogeneity of PTC nuclei, indirectly assessed by GLCM indicators and DWT energy coefficients.
dc.eprint.versionFinal published version
dc.identifier.citationPantic I, Cumic J, Dugalic S, Petroianu GA, Corridon PR. Gray level co-occurrence matrix and wavelet analyses reveal discrete changes in proximal tubule cell nuclei after mild acute kidney injury. Sci Rep. 2023;13(1):4025. Published 2023 Mar 10. doi:10.1038/s41598-023-31205-7
dc.identifier.urihttps://hdl.handle.net/1805/37077
dc.language.isoen_US
dc.publisherSpringer Nature
dc.relation.isversionof10.1038/s41598-023-31205-7
dc.relation.journalScientific Reports
dc.rightsAttribution 4.0 Internationalen
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.sourcePMC
dc.subjectImaging
dc.subjectComputational biology
dc.subjectBioinformatics
dc.subjectBiomarkers
dc.subjectHealth care
dc.subjectNephrology
dc.titleGray level co-occurrence matrix and wavelet analyses reveal discrete changes in proximal tubule cell nuclei after mild acute kidney injur
dc.typeArticle
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