TREM2 is associated with increased risk for Alzheimer's disease in African Americans

dc.contributor.authorJin, Sheng Chih
dc.contributor.authorCarrasquillo, Minerva M.
dc.contributor.authorBenitez, Bruno A.
dc.contributor.authorSkorupa, Tara
dc.contributor.authorCarrell, David
dc.contributor.authorPatel, Dwani
dc.contributor.authorLincoln, Sarah
dc.contributor.authorKrishnan, Siddharth
dc.contributor.authorKachadoorian, Michaela
dc.contributor.authorReitz, Christiane
dc.contributor.authorMayeux, Richard
dc.contributor.authorWingo, Thomas S.
dc.contributor.authorLah, James J.
dc.contributor.authorLevey, Allan I.
dc.contributor.authorMurrell, Jill
dc.contributor.authorHendrie, Hugh
dc.contributor.authorForoud, Tatiana
dc.contributor.authorGraff-Radford, Neill R.
dc.contributor.authorGoate, Alison M.
dc.contributor.authorCruchaga, Carlos
dc.contributor.authorErtekin-Taner, Nilüfer
dc.contributor.departmentDepartment of Psychiatry, IU School of Medicineen_US
dc.date.accessioned2016-05-25T20:04:07Z
dc.date.available2016-05-25T20:04:07Z
dc.date.issued2015
dc.description.abstractBACKGROUND: TREM2 encodes for triggering receptor expressed on myeloid cells 2 and has rare, coding variants that associate with risk for late-onset Alzheimer's disease (LOAD) in Caucasians of European and North-American origin. This study evaluated the role of TREM2 in LOAD risk in African-American (AA) subjects. We performed exonic sequencing and validation in two independent cohorts of >800 subjects. We selected six coding variants (p.R47H, p.R62H, p.D87N, p.E151K, p.W191X, and p.L211P) for case-control analyses in a total of 906 LOAD cases vs. 2,487 controls. RESULTS: We identified significant LOAD risk association with p.L211P (p=0.01, OR=1.27, 95%CI=1.05-1.54) and suggestive association with p.W191X (p=0.08, OR=1.35, 95%CI=0.97-1.87). Conditional analysis suggests that p.L211P, which is in linkage disequilibrium with p.W191X, may be the stronger variant of the two, but does not rule out independent contribution of the latter. TREM2 p.L211P resides within the cytoplasmic domain and p.W191X is a stop-gain mutation within the shorter TREM-2V transcript. The coding variants within the extracellular domain of TREM2 previously shown to confer LOAD risk in Caucasians were extremely rare in our AA cohort and did not associate with LOAD risk. CONCLUSIONS: Our findings suggest that TREM2 coding variants also confer LOAD risk in AA, but implicate variants within different regions of the gene than those identified for Caucasian subjects. These results underscore the importance of investigating different ethnic populations for disease risk variant discovery, which may uncover allelic heterogeneity with potentially diverse mechanisms of action.en_US
dc.eprint.versionFinal published versionen_US
dc.identifier.citationJin, S. C., Carrasquillo, M. M., Benitez, B. A., Skorupa, T., Carrell, D., Patel, D., … Ertekin-Taner, N. (2015). TREM2 is associated with increased risk for Alzheimer’s disease in African Americans. Molecular Neurodegeneration, 10, 19. http://doi.org/10.1186/s13024-015-0016-9en_US
dc.identifier.issn1750-1326en_US
dc.identifier.urihttps://hdl.handle.net/1805/9660
dc.language.isoen_USen_US
dc.publisherSpringer (Biomed Central Ltd.)en_US
dc.relation.isversionof10.1186/s13024-015-0016-9en_US
dc.relation.journalMolecular Neurodegenerationen_US
dc.rightsAttribution 4.0 International
dc.rights.urihttps://creativecommons.org/licenses/by/4.0
dc.sourcePMCen_US
dc.subjectAfrican Americansen_US
dc.subjectgeneticsen_US
dc.subjectAlzheimer Diseaseen_US
dc.subjectGenetic Predisposition to Diseaseen_US
dc.subjectMembrane Glycoproteinsen_US
dc.subjectReceptors, Immunologicen_US
dc.subjectMutationen_US
dc.titleTREM2 is associated with increased risk for Alzheimer's disease in African Americansen_US
dc.typeArticleen_US
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