RNA-Seq Reveals Acute Manganese Exposure Increases Endoplasmic Reticulum Related and Lipocalin mRNAs in Caenorhabditis elegans

dc.contributor.authorRudgalvyte, Martina
dc.contributor.authorPeltonen, Juhani
dc.contributor.authorLakso, Merja
dc.contributor.authorNass, Richard
dc.contributor.authorWong, Garry
dc.contributor.departmentDepartment of Pharmacology and Toxicology, IU School of Medicineen_US
dc.date.accessioned2016-05-06T16:12:18Z
dc.date.available2016-05-06T16:12:18Z
dc.date.issued2016-02
dc.description.abstractManganese (Mn) is an essential nutrient; nonetheless, excessive amounts can accumulate in brain tissues causing manganism, a severe neurological condition. Previous studies have suggested oxidative stress, mitochondria dysfunction, and impaired metabolism pathways as routes for Mn toxicity. Here, we used the nematode Caenorhabditis elegans to analyze gene expression changes after acute Mn exposure using RNA-Seq. L1 stage animals were exposed to 50 mM MnCl2 for 30 min and analyzed at L4. We identified 746 up- and 1828 downregulated genes (FDR corrected p < 0.05; two-fold change) that included endoplasmic reticulum related abu and fkb family genes, as well as six of seven lipocalin-related (lpr) family members. These were also verified by qRT-PCR. RNA interference of lpr-5 showed a dramatic increase in whole body vulnerability to Mn exposure. Our studies demonstrate that Mn exposure alters gene transcriptional levels in different cell stress pathways that may ultimately contribute to its toxic effects.en_US
dc.eprint.versionFinal published versionen_US
dc.identifier.citationRudgalvyte, M., Peltonen, J., Lakso, M., Nass, R., & Wong, G. (2016). RNA-Seq Reveals Acute Manganese Exposure Increases Endoplasmic Reticulum Related and Lipocalin mRNAs in Caenorhabditis elegans. Journal of Biochemical and Molecular Toxicology, 30(2), 97–105. http://doi.org/10.1002/jbt.21768en_US
dc.identifier.urihttps://hdl.handle.net/1805/9547
dc.language.isoenen_US
dc.publisherWileyen_US
dc.relation.isversionof10.1002/jbt.21768en_US
dc.relation.journalJournal of Biochemical and Molecular Toxicologyen_US
dc.rightsAttribution-NonCommercial-NoDerivs 3.0 United States
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/us/
dc.sourcePublisheren_US
dc.subjecttranscriptomicsen_US
dc.subjectheavy metalen_US
dc.subjectnext-generation sequencingen_US
dc.titleRNA-Seq Reveals Acute Manganese Exposure Increases Endoplasmic Reticulum Related and Lipocalin mRNAs in Caenorhabditis elegansen_US
dc.typeArticleen_US
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