Mining directional drug interaction effects on myopathy using the FAERS database

dc.contributor.authorChasioti, Danai
dc.contributor.authorYao, Xiaohui
dc.contributor.authorZhang, Pengyue
dc.contributor.authorLerner, Samuel
dc.contributor.authorQuinney, Sara K.
dc.contributor.authorNing, Xia
dc.contributor.authorLi, Lang
dc.contributor.authorShen, Li
dc.contributor.departmentRadiology and Imaging Sciences, School of Medicineen_US
dc.date.accessioned2019-01-30T17:34:26Z
dc.date.available2019-01-30T17:34:26Z
dc.date.issued2018-10
dc.description.abstractMining high-order drug-drug interaction (DDI) induced adverse drug effects from electronic health record (EHR) databases is an emerging area, and very few studies have explored the relationships between high-order drug combinations. We investigate a novel pharmacovigilance problem for mining directional DDI effects on myopathy using the FDA Adverse Event Reporting System (FAERS) database. Our work provides information on the risk of myopathy associated with adding new drugs on the already prescribed medication, and visualizes the identified directional DDI patterns as user-friendly graphical representation. We utilize the Apriori algorithm to extract frequent drug combinations from the FAERS database. We use odds ratio (OR) to estimate the risk of myopathy associated with directional DDI. We create a tree-structured graph to visualize the findings for easy interpretation. Our method confirmed myopathy association with previously reported HMG-CoA reductase inhibitors like rosuvastatin, fluvastatin, simvastatin and atorvastatin. New, previously unidentified but mechanistically plausible associations with myopathy were also observed, such as the DDI between pamidronate and levofloxacin. Additional top findings are gadolinium-based imaging agents, which however are often used in myopathy diagnosis. Other DDIs with no obvious mechanism are also reported, such as that of sulfamethoxazole with trimethoprim and potassium chloride. This study shows the feasibility to estimate high-order directional DDIs in a fast and accurate manner. The results of the analysis could become a useful tool in the specialists' hands through an easy-to-understand graphic visualization.en_US
dc.eprint.versionAuthor's manuscripten_US
dc.identifier.citationChasioti, D., Yao, X., Zhang, P., Lerner, S., Quinney, S. K., Ning, X., … Shen, L. (2018). Mining directional drug interaction effects on myopathy using the FAERS database. IEEE Journal of Biomedical and Health Informatics, 1–1. https://doi.org/10.1109/JBHI.2018.2874533en_US
dc.identifier.urihttps://hdl.handle.net/1805/18265
dc.language.isoenen_US
dc.publisherIEEEen_US
dc.relation.isversionof10.1109/JBHI.2018.2874533en_US
dc.relation.journalIEEE Journal of Biomedical and Health Informaticsen_US
dc.rightsPublisher Policyen_US
dc.sourceAuthoren_US
dc.subjectdirectional effecten_US
dc.subjecthigh-order drug interactionen_US
dc.subjectFAERSen_US
dc.titleMining directional drug interaction effects on myopathy using the FAERS databaseen_US
dc.typeArticleen_US
Files
Original bundle
Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
Chasioti_2018_mining.pdf
Size:
393.17 KB
Format:
Adobe Portable Document Format
Description:
License bundle
Now showing 1 - 1 of 1
No Thumbnail Available
Name:
license.txt
Size:
1.99 KB
Format:
Item-specific license agreed upon to submission
Description: