Improved Adverse Drug Event Prediction Through Information Component Guided Pharmacological Network Model (IC-PNM)

dc.contributor.authorJi, Xiangmin
dc.contributor.authorWang, Lei
dc.contributor.authorHua, Liyan
dc.contributor.authorWang, Xueying
dc.contributor.authorZhang, Pengyue
dc.contributor.authorShendre, Aditi
dc.contributor.authorFeng, Weixing
dc.contributor.authorLi, Jin
dc.contributor.authorLi, Lang
dc.contributor.departmentBiostatistics and Health Data Science, Richard M. Fairbanks School of Public Health
dc.date.accessioned2024-10-21T11:14:15Z
dc.date.available2024-10-21T11:14:15Z
dc.date.issued2021
dc.description.abstractImproving adverse drug event (ADE) prediction is highly critical in pharmacovigilance research. We propose a novel information component guided pharmacological network model (IC-PNM) to predict drug-ADE signals. This new method combines the pharmacological network model and information component, a Bayes statistics method. We use 33,947 drug-ADE pairs from the FDA Adverse Event Reporting System (FAERS) 2010 data as the training data, and the new 21,065 drug-ADE pairs from FAERS 2011-2015 as the validations samples. The IC-PNM data analysis suggests that both large and small sample size drug-ADE pairs are needed in training the predictive model for its prediction performance to reach an area under the receiver operating characteristic curve (\textAUROC)= 0.82(AUROC)=0.82. On the other hand, the IC-PNM prediction performance improved to \textAUROC= 0.91AUROC=0.91 if we removed the small sample size drug-ADE pairs from the prediction model during validation.
dc.eprint.versionFinal published version
dc.identifier.citationJi X, Wang L, Hua L, et al. Improved Adverse Drug Event Prediction Through Information Component Guided Pharmacological Network Model (IC-PNM). IEEE/ACM Transactions on Computational Biology and Bioinformatics. 2021;18(3):1113-1121. doi:10.1109/TCBB.2019.2928305
dc.identifier.urihttps://hdl.handle.net/1805/44093
dc.language.isoen_US
dc.publisherIEEE
dc.relation.isversionof10.1109/TCBB.2019.2928305
dc.relation.journalIEEE/ACM Transactions on Computational Biology and Bioinformatics
dc.rightsAttribution 4.0 Internationalen
dc.rights.urihttps://creativecommons.org/licenses/by/4.0
dc.sourcePublisher
dc.subjectAdverse drug event
dc.subjectBiological system modeling
dc.subjectData models
dc.subjectDatabases
dc.subjectDrugs
dc.subjectInformation component
dc.subjectIntegrated circuits
dc.subjectPharmacological network model
dc.subjectPharmacovigilance
dc.subjectPredictive models
dc.subjectTraining data
dc.titleImproved Adverse Drug Event Prediction Through Information Component Guided Pharmacological Network Model (IC-PNM)
dc.typeArticle
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