Ambient ionization mass spectrometric analysis of human surgical specimens to distinguish renal cell carcinoma from healthy renal tissue
dc.contributor.author | Alfaro, Clint M. | |
dc.contributor.author | Jarmusch, Alan K. | |
dc.contributor.author | Pirro, Valentina | |
dc.contributor.author | Kerian, Kevin S. | |
dc.contributor.author | Masterson, Timothy A. | |
dc.contributor.author | Cheng, Liang | |
dc.contributor.author | Cooks, R. Graham | |
dc.contributor.department | Urology, School of Medicine | en_US |
dc.date.accessioned | 2018-02-20T15:37:53Z | |
dc.date.available | 2018-02-20T15:37:53Z | |
dc.date.issued | 2016-08 | |
dc.description.abstract | Touch spray - mass spectrometry (TS-MS) is an ambient ionization technique (ionization of unprocessed samples in the open air) that may find intraoperative applications in quickly identifying the disease state of cancerous tissues and in defining surgical margins. In this study, TS-MS was performed on fresh kidney tissue (~1–5 cm3), within one hour of resection, from 21 human subjects afflicted by renal cell carcinoma (RCC). The preliminary diagnostic value of TS-MS data taken from freshly resected tissue was evaluated. Principal component analysis (PCA) of the negative ion mode (m/z 700–1000) data provided separation between RCC (16 samples) and healthy renal tissue (13 samples). Linear discriminant analysis (LDA) on the PCA compressed data estimated sensitivity (true positive rate) and specificity (true negative rate) of 98% and 95%, respectively, based on histopathological evaluation. The results indicate that TS-MS might provide rapid diagnostic information in spite of the complexity of unprocessed kidney tissue and the presence of interferences such as urine and blood. Desorption electrospray ionization imaging (DESI-MSI) in the negative ionization mode was performed on the tissue specimens after TS-MS analysis as a reference method. The DESI imaging experiments provided phospholipid profiles (m/z 700–1000) that also separated RCC and healthy tissue in the PCA space, with PCA-LDA sensitivity and specificity of 100% and 89%, respectively. The TS and DESI loading plots indicated that different ions contributed most to the separation of RCC from healthy renal tissue (m/z 794 [PC 34:1+Cl]− and 844 [PC 38:4+Cl]− for TS vs. m/z 788 [PS 36:1-H]− and 810 [PS 38:4-H]− for DESI), while m/z 885 ([PI 38:4-H]−) was important in both TS and DESI. The prospect, remaining hurdles, and future work required for translating TS-MS into a method of intraoperative tissue diagnosis is discussed., | en_US |
dc.eprint.version | Author's manuscript | en_US |
dc.identifier.citation | Alfaro, C. M., Jarmusch, A. K., Pirro, V., Kerian, K. S., Masterson, T. A., Cheng, L., & Cooks, R. G. (2016). Ambient ionization mass spectrometric analysis of human surgical specimens to distinguish renal cell carcinoma from healthy renal tissue. Analytical and Bioanalytical Chemistry, 408(20), 5407–5414. https://doi.org/10.1007/s00216-016-9627-4 | en_US |
dc.identifier.issn | 1618-2642 | en_US |
dc.identifier.uri | https://hdl.handle.net/1805/15243 | |
dc.language.iso | en_US | en_US |
dc.publisher | Springer | en_US |
dc.relation.isversionof | 10.1007/s00216-016-9627-4 | en_US |
dc.relation.journal | Analytical and bioanalytical chemistry | en_US |
dc.rights | Publisher Policy | en_US |
dc.source | PMC | en_US |
dc.subject | renal cell carcinoma | en_US |
dc.subject | mass spectrometric analysis | en_US |
dc.subject | healthy renal tissue | en_US |
dc.subject | Ambient Ionization | en_US |
dc.subject | analysis of human surgical specimens | en_US |
dc.title | Ambient ionization mass spectrometric analysis of human surgical specimens to distinguish renal cell carcinoma from healthy renal tissue | en_US |
dc.type | Article | en_US |