Implementation of a Laboratory Information Management System To Manage Genomic Samples

dc.contributor.advisorMerchant, Mahesh
dc.contributor.authorWitty, Derick
dc.contributor.otherPerumal, Narayanan B.
dc.contributor.otherTurpin, Joseph
dc.date.accessioned2013-09-05T14:31:27Z
dc.date.available2013-09-05T14:31:27Z
dc.date.issued2013-09-05
dc.degree.date2012en_US
dc.degree.disciplineSchool of Informaticsen_US
dc.degree.grantorIndiana Universityen_US
dc.degree.levelM.S.en_US
dc.descriptionIndiana University-Purdue University Indianapolis (IUPUI)en_US
dc.description.abstractA Laboratory Information Management Systems (LIMS) is designed to manage laboratory processes and data. It has the ability to extend the core functionality of the LIMS through configuration tools and add-on modules to support the implementation of complex laboratory workflows. The purpose of this project is to demonstrate how laboratory data and processes from a complex workflow can be implemented using a LIMS. Genomic samples have become an important part of the drug development process due to advances in molecular testing technology. This technology evaluates genomic material for disease markers and provides efficient, cost-effective, and accurate results for a growing number of clinical indications. The preparation of the genomic samples for evaluation requires a complex laboratory process called the precision aliquotting workflow. The precision aliquotting workflow processes genomic samples into precisely created aliquots for analysis. The workflow is defined by a set of aliquotting scheme attributes that are executed based on scheme specific rules logic. The aliquotting scheme defines the attributes of each aliquot based on the achieved sample recovery of the genomic sample. The scheme rules logic executes the creation of the aliquots based on the scheme definitions. LabWare LIMS is a Windows® based open architecture system that manages laboratory data and workflow processes. A LabWare LIMS model was developed to implement the precision aliquotting workflow using a combination of core functionality and configured code.en_US
dc.identifier.urihttps://hdl.handle.net/1805/3521
dc.identifier.urihttp://dx.doi.org/10.7912/C2/805
dc.language.isoen_USen_US
dc.subjectGenomicen_US
dc.subjectLabWareen_US
dc.subjectLIMSen_US
dc.subjectLaboratoryen_US
dc.subjectWorkflowen_US
dc.subjectImplementationen_US
dc.subjectConfigurationen_US
dc.subject.lcshManagement information systems -- Researchen_US
dc.subject.lcshWorkflow management systemsen_US
dc.subject.lcshSoftware configuration managementen_US
dc.subject.lcshComputer logicen_US
dc.subject.lcshGenomics -- Data processingen_US
dc.subject.lcshComputer architecture -- Data processingen_US
dc.subject.lcshData structures (Computer science)en_US
dc.subject.lcshArtificial intelligence -- Analysisen_US
dc.subject.lcshMedical informatics -- Researchen_US
dc.titleImplementation of a Laboratory Information Management System To Manage Genomic Samplesen_US
dc.typeThesisen
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