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Browsing by Subject "computational fluid dynamics"
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Item Building a scientific workflow framework to enable real‐time machine learning and visualization(Wiley, 2019-08) Li, Feng; Song, Fengguang; Computer and Information Science, School of ScienceNowadays, we have entered the era of big data. In the area of high performance computing, large‐scale simulations can generate huge amounts of data with potentially critical information. However, these data are usually saved in intermediate files and are not instantly visible until advanced data analytics techniques are applied after reading all simulation data from persistent storages (eg, local disks or a parallel file system). This approach puts users in a situation where they spend long time on waiting for running simulations while not knowing the status of the running job. In this paper, we build a new computational framework to couple scientific simulations with multi‐step machine learning processes and in‐situ data visualizations. We also design a new scalable simulation‐time clustering algorithm to automatically detect fluid flow anomalies. This computational framework is built upon different software components and provides plug‐in data analysis and visualization functions over complex scientific workflows. With this advanced framework, users can monitor and get real‐time notifications of special patterns or anomalies from ongoing extreme‐scale turbulent flow simulations.Item Image Based Computational Hemodynamics for Non-Invasive and Patient-Specific Assessment of Arterial Stenosis(2019-08) Khan, Md Monsurul Islam; Yu, Huidan; Wagner, Diane; Zhu, LikunWhile computed tomographic angiography (CTA) has emerged as a powerful noninvasive option that allows for direct visualization of arterial stenosis(AS), it cant assess the hemodynamic abnormality caused by an AS. Alternatively, trans-stenotic pressure gradient (TSPG) and fractional flow reserve (FFR) are well-validated hemodynamic indices to assess the ischemic severity of an AS. However, they have significant restriction in practice due to invasiveness and high cost. To fill the gap, a new computational modality, called InVascular has been developed for non-invasive quantification TSPG and/or FFR based on patient's CTA, aiming to quantify the hemodynamic abnormality of the stenosis and help to assess the therapeutic/surgical benefits of treatment for the patient. Such a new capability gives rise to a potential of computation aided diagnostics and therapeutics in a patient-specific environment for ASs, which is expected to contribute to precision planning for cardiovascular disease treatment. InVascular integrates a computational modeling of diseases arteries based on CTA and Doppler ultrasonography data, with cutting-edge Graphic Processing Unit (GPU) parallel-computing technology. Revolutionary fast computing speed enables noninvasive quantification of TSPG and/or FFR for an AS within a clinic permissible time frame. In this work, we focus on the implementation of inlet and outlet boundary condition (BC) based on physiological image date and and 3-element Windkessel model as well as lumped parameter network in volumetric lattice Boltzmann method. The application study in real human coronary and renal arterial system demonstrates the reliability of the in vivo pressure quantification through the comparisons of pressure waves between noninvasive computational and invasive measurement. In addition, parametrization of worsening renal arterial stenosis (RAS) and coronary arterial stenosis (CAS) characterized by volumetric lumen reduction (S) enables establishing the correlation between TSPG/FFR and S, from which the ischemic severity of the AS (mild, moderate, or severe) can be identified. In this study, we quantify TSPG and/or FFR for five patient cases with visualized stenosis in coronary and renal arteries and compare the non-invasive computational results with invasive measurement through catheterization. The ischemic severity of each AS is predicted. The results of this study demonstrate the reliability and clinical applicability of InVascular.Item Volumetric lattice Boltzmann method for wall stresses of image-based pulsatile flows(Springer, 2022-02-01) Zhang, Xiaoyu; Gomez-Paz, Joan; Chen, Xi; McDonough, J. M.; Islam, Md Mahfuzul; Andreopoulos, Yiannis; Zhu, Luoding; Yu, Huidan; Surgery, School of MedicineImage-based computational fluid dynamics (CFD) has become a new capability for determining wall stresses of pulsatile flows. However, a computational platform that directly connects image information to pulsatile wall stresses is lacking. Prevailing methods rely on manual crafting of a hodgepodge of multidisciplinary software packages, which is usually laborious and error-prone. We present a new computational platform, to compute wall stresses in image-based pulsatile flows using the volumetric lattice Boltzmann method (VLBM). The novelty includes: (1) a unique image processing to extract flow domain and local wall normality, (2) a seamless connection between image extraction and VLBM, (3) an en-route calculation of strain-rate tensor, and (4) GPU acceleration (not included here). We first generalize the streaming operation in the VLBM and then conduct application studies to demonstrate its reliability and applicability. A benchmark study is for laminar and turbulent pulsatile flows in an image-based pipe (Reynolds number: 10 to 5000). The computed pulsatile velocity and shear stress are in good agreements with Womersley's analytical solutions for laminar pulsatile flows and concurrent laboratory measurements for turbulent pulsatile flows. An application study is to quantify the pulsatile hemodynamics in image-based human vertebral and carotid arteries including velocity vector, pressure, and wall-shear stress. The computed velocity vector fields are in reasonably well agreement with MRA (magnetic resonance angiography) measured ones. This computational platform is good for image-based CFD with medical applications and pore-scale porous media flows in various natural and engineering systems.