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Item Bioinformatic Analysis of Proteomic Changes That Occur in an Airway Epithelial Cell Line in Response to Exposure to Physiologically Relevant Concentrations of Carbon Nanotubes(Office of the Vice Chancellor for Research, 2013-04-05) Li, Pin; Lewis, Shanta; Witzmann, Frank; Blazer-Yost, Bonnie L.Carbon nanomaterials are widely produced and used in industry, medicine and scientific research. To examine the impact of acute exposure to nanoparticles on human health, the human airway epithelial cell line, Calu-3, was used to evaluate potential alterations in cellular function of airway epithelia after 24 hours exposure to different concentrations of two common carbon nanoparticles, single- and multi-wall carbon nanotubes (SWCNT, MWCNT). After exposure to the nanoparticles, label-free quantitative mass spectrometry (LFQMS) was used to study the differential protein expression in Calu-3 cells. Ingenuity Pathway Analysis (IPA) was used to conduct a bioinformatic analysis of proteins identified in LFQMS. Changes in protein abundance generated in response to 100 ng/ml exposure of both MWCNT and SWCNT suggest that cell functions of cell death and survival, cell-to-cell signaling and interaction, cellular assembly and organization, cellular growth and proliferation, infectious disease, molecular transport and protein synthesis are predicted to be effected. The majority of the protein changes represent a decrease in amount suggesting a shut down of metabolism to protect cells. The STRING database was used to analyze the protein networks in different functions. Interestingly some proteins like cadherin 1 (CDH1), signal transducer and activator of transcription 1 (STAT1), junction plakoglobin (JUP), apoptosis-associated speck-like protein containing a CARD (PYCARD), appear in several functions and tend to be in the center of the networks, which suggest they may play important roles in the cell function and activity.Item Effects of carbon nanotubes on barrier epithelial cells via effects on lipid bilayers(2013) Lewis, Shanta; Blazer-Yost, Bonnie; Petrache, Horia; Witzmann, F. A. (Frank A.); Atkinson, SimonCarbon nanotubes (CNTs) are one of the most common nanoparticles (NP) found in workplace air. Therefore, there is a strong chance that these NP will enter the human body. They have similar physical properties to asbestos, a known toxic material, yet there is limited evidence showing that CNTs may be hazardous to human barrier epithelia. In previous studies done in our laboratory, the effects of CNTs on the barrier function in the human airway epithelial cell line (Calu-3) were measured. Measurements were done using electrophysiology, a technique which measures both transepithelial electrical resistance (TEER), a measure of monolayer integrity, and short circuit current (SCC) which is a measure of vectorial ion transport across the cell monolayer. The research findings showed that select physiologically relevant concentrations of long single-wall (SW) and multi-wall (MW) CNTs significantly decreased the stimulated SCC of the Calu-3 cells compared to untreated cultures. Calu-3 cells showed decreases in TEER when incubated for 48 hours (h) with concentrations of MWCNT ranging from 4µg/cm2 to 0.4ng/cm2 and SWCNT ranging from 4µg/cm2 to 0.04ng/cm2. The impaired cellular function, despite sustained cell viability, led us to investigate the mechanism by which the CNTs were affecting the cell membrane. We investigated the interaction of short MWCNTs with model lipid membranes using an ion channel amplifier, Planar Bilayer Workstation. Membranes were synthesized using neutral diphytanoylphosphatidylcholine (DPhPC) and negatively charged diphytanoylphosphatidylserine (DPhPS) lipids. Gramicidin A (GA), an ion channel reporter protein, was used to measure changes in ion channel conductance due to CNT exposures. Synthetic membranes exposed to CNTs allowed bursts of currents to cross the membrane when they were added to the membrane buffer system. When added to the membrane in the presence of GA, they distorted channel formation and reduced membrane stability.