Browsing by Author "Bowler, Russell"

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    MSPrep--summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data
    (Oxford University Press, 2014-01-01) Hughes, Grant; Cruickshank-Quinn, Charmion; Reisdorph, Richard; Lutz, Sharon; Petrache, Irina; Reisdorph, Nichole; Bowler, Nichole; Bowler, Russell; Kechris, Katerina; Department of Medicine, IU School of Medicine
    MOTIVATION: Although R packages exist for the pre-processing of metabolomic data, they currently do not incorporate additional analysis steps of summarization, filtering and normalization of aligned data. We developed the MSPrep R package to complement other packages by providing these additional steps, implementing a selection of popular normalization algorithms and generating diagnostics to help guide investigators in their analyses.